A signal boosting technique for gene prediction

A signal boosting technique for gene prediction

This paper presents the signal boosting technique for gene and exon identification of a DNA sequence. Newly proposed signal boosting technique is used to enhance the coding region and improve the likelihood of correctly identifying the coding region. This new method is compared with other genomic s...

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Bibliographic Details
Main Authors: Gunawan, Teddy Surya, Ambikairajah, Eliathamby, Epps, Julien
Format: Conference or Workshop Item
Language:English
Published: IEEE Xplore 2007
Subjects:
QH426 Genetics
Online Access:http://irep.iium.edu.my/170/
http://irep.iium.edu.my/170/
http://irep.iium.edu.my/170/
http://irep.iium.edu.my/170/1/a_signal_boosting_tecniques.pdf
id iium-170
recordtype eprints
spelling iium-1702013-06-26T05:18:29Z http://irep.iium.edu.my/170/ A signal boosting technique for gene prediction Gunawan, Teddy Surya Ambikairajah, Eliathamby Epps, Julien QH426 Genetics This paper presents the signal boosting technique for gene and exon identification of a DNA sequence. Newly proposed signal boosting technique is used to enhance the coding region and improve the likelihood of correctly identifying the coding region. This new method is compared with other genomic signal processing techniques, such as DFT, IIR anti-notch filter, and multistage filters. Results show that the ratio of coding to non-coding energy was enhanced by almost twice. Furthermore, the proposed method outperforms other methods in terms of sensitivity, specificity, and prediction rate, when testing with 78 sequences from HMR195 database. IEEE Xplore 2007 Conference or Workshop Item PeerReviewed application/pdf en http://irep.iium.edu.my/170/1/a_signal_boosting_tecniques.pdf Gunawan, Teddy Surya and Ambikairajah, Eliathamby and Epps, Julien (2007) A signal boosting technique for gene prediction. In: Proceeding of 6th International Conference on Information, Communications and Signal Processing (ICICS 2007), 10-13 December 2007, Singapore. http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=4517686 10.1109/ICASSP.2008.4517686
repository_type Digital Repository
institution_category Local University
institution International Islamic University Malaysia
building IIUM Repository
collection Online Access
language English
topic QH426 Genetics
spellingShingle QH426 Genetics
Gunawan, Teddy Surya
Ambikairajah, Eliathamby
Epps, Julien
A signal boosting technique for gene prediction
description This paper presents the signal boosting technique for gene and exon identification of a DNA sequence. Newly proposed signal boosting technique is used to enhance the coding region and improve the likelihood of correctly identifying the coding region. This new method is compared with other genomic signal processing techniques, such as DFT, IIR anti-notch filter, and multistage filters. Results show that the ratio of coding to non-coding energy was enhanced by almost twice. Furthermore, the proposed method outperforms other methods in terms of sensitivity, specificity, and prediction rate, when testing with 78 sequences from HMR195 database.
format Conference or Workshop Item
author Gunawan, Teddy Surya
Ambikairajah, Eliathamby
Epps, Julien
author_facet Gunawan, Teddy Surya
Ambikairajah, Eliathamby
Epps, Julien
author_sort Gunawan, Teddy Surya
title A signal boosting technique for gene prediction
title_short A signal boosting technique for gene prediction
title_full A signal boosting technique for gene prediction
title_fullStr A signal boosting technique for gene prediction
title_full_unstemmed A signal boosting technique for gene prediction
title_sort signal boosting technique for gene prediction
publisher IEEE Xplore
publishDate 2007
url http://irep.iium.edu.my/170/
http://irep.iium.edu.my/170/
http://irep.iium.edu.my/170/
http://irep.iium.edu.my/170/1/a_signal_boosting_tecniques.pdf
first_indexed 2023-09-18T20:07:08Z
last_indexed 2023-09-18T20:07:08Z
_version_ 1777407233558052864

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