Phylogeny of sea cucumber (Echinodermata: Holothuroidea) as inferred from 16S Mitochondrial rRNA gene sequences

Phylogeny of sea cucumber (Echinodermata: Holothuroidea) as inferred from 16S Mitochondrial rRNA gene sequences

This study aimed to determine phylogenetic relationship between and among selected species of sea cucumbers (Echinodermata: Holothuroidea) using 16S mitochondrial ribosomal RNA (rRNA) gene. Phylogenetic analyses of 37 partial sequences of 16S mitochondrial rRNA gene using three main methods namely...

Full description

Bibliographic Details
Main Author:	Kamarudin, Kamarul Rahim
Format:	Article
Language:	English
Published:	SPC Beche-de-mer Information Bulletin 2011
Subjects:	QL Zoology
Online Access:	http://irep.iium.edu.my/12715/ http://irep.iium.edu.my/12715/ http://irep.iium.edu.my/12715/1/2011_BDM31_Jan_2011_Kamarul_SM_2010.pdf

Similar Items

Genetic Variation among Sea Cucumbers (Echinodermata: Holothuroidea) in Malaysia as inferred from 16S Mitochondrial rRNA Gene
by: Kamarul Zaman, Nur Hazami, et al.
Published: (2006)

Phylogeny of Holothuria leucospilota (Echinodermata: Holothuroidea) as inferred from cytochrome c oxidase I gene sequences
by: Idris, Mohd Yaman, et al.
Published: (2010)

Phylogeny of sea cucumber (echinodermata: holothuroidea) as inferred from 16s mitochondrial rRNA gene sequences
by: Kamarul Rahim Kamarudin,, et al.
Published: (2010)

Phylogeny of sea cucumber (Echinodermata: Holothuroidea) as inferred from 16S mitochondrial rRNA gene sequences
by: Kamarudin, Kamarul Rahim, et al.
Published: (2010)

Phylogeny of Holothuria leucospilota (Echinodermata: Holothuroidea)as inferred from cytochrome c oxidase I mtDNA gene sequences
by: Idris, Mohd Yaman, et al.
Published: (2011)

16S rRNA gene sequencing for phylogenetic analysis of Malaysian sea anemones
by: Zulkipli, Farah Hanis, et al.
Published: (2014)

Species identification and molecular phylogenetics of processed sea cucumbers from Malaysian market based on 12S mitochondrial rRNA gene
by: Kamarudin, Kamarul Rahim, et al.
Published: (2018)

Sea cucumber (Echinodermata: Holothuroidea) species richness at selected localities in Malaysia
by: Kamarudin, Kamarul Rahim, et al.
Published: (2015)

Phylogenetic analysis of sea cucumbers (Echinodermata: Holothuroidea) in Malaysia as inferred from Cytochrome C Oxidase I MtDNA
by: Hussin, Rosnah, et al.
Published: (2006)

Distribution and taxonomic revision of sea cucumbers (Echinodermata: Holothuroidea) in several populations of Malaysia
by: Kamarudin, Kamarul Rahim, et al.
Published: (2005)

Molecular phylogeny of horseshoe crab using mitochondrial Cox1 gene as a benchmark sequence
by: John, Akbar, et al.
Published: (2010)

The littoral sea cucumbers (Echinodermata: Holothuroidea) of Guam re-assessed – a diversity curve that still does not asymptote
by: Michonneau , Francois, et al.
Published: (2013)

Phylogenetic relationship of several indigenous freshwater fishes in Sarawak inferred from partial sequencing of Cytochrome b Mitochondrial DNA (MtDNA) gene
by: Esa, Yuzine, et al.
Published: (2003)

Phylogenetics of sea cucumbers in Malaysia based on Mitochondrial DNA
by: Ahmad, Hajar Fauzan, et al.
Published: (2008)

The low genetic diversity of an introduced freshwater fish, Helostoma temminckii (Anabantidae) in Sarawak, Malaysian Borneo as inferred by sequencing of Cytochrome C Oxidase I (COI) Mitochondrial Gene
by: Esa, Yuzine, et al.
Published: (2003)

Phylogenetic relationships among Mahseers (Cyprindae) in Malaysia inferred from Sequencing of a cytochrome c oxidase I (COI) Mitochondrial DNA (mtDNA) segment
by: Esa, Yuzine, et al.
Published: (2007)

Molecular phylogeny of horseshoe crab
by: Yunus, Kamaruzzaman, et al.
Published: (2011)

Revised phylogeny of extant xiphosurans (Horseshoe Crabs)
by: John, Akbar, et al.
Published: (2016)

Taxonomic revision of Sea Cucumber (Holothuroidea) in Malaysia and identification of molecular marker. Final report on International Islamic University Malaysia (IIUM) Short-term Research Grant – ST43
by: Kamarudin, Kamarul Rahim, et al.
Published: (2006)

Ossicle shapes and mitochondrial DNA profiles of holothuria and stichopus species
by: Anua, Mohd Hanafi, et al.
Published: (2008)

Paraphyly of the Genus Holothuria (Aspidochirotida: Holothuriidae) as Inferred from 16S Mitochondrial rRNA Gene Sequences
by: Kamarudin, Kamarul Rahim, et al.
Published: (2006)

Phylogenetic relationships within the genus Holothuria inferred from 16S mitochondrial rRNA gene sequences
by: Kamarudin, Kamarul Rahim, et al.
Published: (2016)

Genetic diversity of the orange-spotted grouper (Epinephelus coioides) in Terengganu Malaysia based on mitochondrial cytochrome b sequence data
by: Waludin, Shaidatul Nadia, et al.
Published: (2018)

Effect of radiocesium on mitochondrial DNA sequence in masu salmon
by: Yusof, Muhammad Fitri, et al.
Published: (2017)

Systematics of Sea Cucumbers of the Genus Holothuria (Aspidochirotida: Holothuriidae) and Phylogeography in H. leucospilota. Final report P3-R on Fundamental Research Grant (FRGS) Category A - FRGS0106-25 to Ministry of Higher Education (MOHE) Malaysia
by: Kamarudin, Kamarul Rahim
Published: (2010)

Mitochondrial DNA diversity of wild and hatchery reared strains of Indian Lates calcarifer (Bloch)
by: Kumar, Prasanna, et al.
Published: (2016)

Efficiency of Universal Barcode Gene (Coxi) on morphologically cryptic mugilidae fishes delineation
by: John, Akbar, et al.
Published: (2011)

Genetic variation in several populations of Puntius schwanenfeldii (Cyprinidae) from Malaysia using Cytochrome b mtDNA gene
by: Kamarudin, Kamarul Rahim, et al.
Published: (2003)

Species identification of processed sea cucumbers from Malaysian market based on concatenated gene sequences of mitochondrial rRNA genes
by: Kamarudin, Kamarul Rahim, et al.
Published: (2019)

Phylogenetic relationships within the Genus Holothuria inferred from 16S Mitochondiral rRNA Gene Sequences
by: Kamarul Rahim Kamarudin,, et al.
Published: (2016)

DNA barcoding of Stolephorus indicus, Stolephorus commersonnii and Terapon jarbua of Parangipettai Coastal Waters
by: Khan, S. Ajmal, et al.
Published: (2010)

DNA barcoding of Lates calcarifer (Bloch, 1970)
by: John, Akbar, et al.
Published: (2010)

Spatial variation and community composition of phytoplankton along the Pahang estuary, Malaysia
by: Khan Chowdhury, Ahmed Jalal, et al.
Published: (2011)

Mechanism in the clot formation of horseshoe crab blood during bacterial endotoxin invasion
by: John, Akbar, et al.
Published: (2010)

Bacterial communities in Kuantan estuary of Pahang, Malaysia
by: Khan Chowdhury, Ahmed Jalal, et al.
Published: (2010)

Bacterial pollution in Molluscs Arch Clam, Orbicularia orbiculata and Blood Cockle, Anadara granosa of Pahang estuary, Malaysia
by: Khan Chowdhury, Ahmed Jalal, et al.
Published: (2009)

Endo sensor bacterial endotoxin detector in liquid biological samples
by: John, Akbar, et al.
Published: (2011)

Mineral and heavy metal contents of marine fin fish in Langkawi Island, Malaysia
by: Jaswir, Irwandi, et al.
Published: (2009)

Extremely long cupulae of embryonic neuromasts in cyprinid fish
by: Mukai, Yukinori, et al.
Published: (1993)

Phylogenetic analysis of Macroglossus Sobrinus from Peninsular Malaysia
by: Fauzan Ahmad, Hajar, et al.
Published: (2008)

Cannot write session to /tmp/vufind_sessions/sess_975mko81lc6q4v5n68796g1gf5